London Daily

Focus on the big picture.
Tuesday, Jun 30, 2026

Omicron: How do you detect it?

Omicron: How do you detect it?

The first cases of the new Omicron variant of coronavirus have now been detected in the UK, after it was highlighted by scientists in South Africa as a potentially worrying new strain.
What tests are used to detect Omicron?


Swabs from PCR tests, which are sent to a lab for analysis, detect whether people are infected with coronavirus or not.

Depending on which lab the swabs are sent to, some can also help identify particular variants, such as Delta or Omicron.

Between a third and a half of UK labs - but not all - have the required technology to do this.

PCR tests are the ones you can order from the government website if you have symptoms, or order from a private company if you need one for travel purposes. There are many different makes.

How do we know that Omicron is in the UK?


The swabs from PCR tests that have given a positive result for what looks like Omicron have been sent to a lab for a full genetic analysis, using a technique known as genomic sequencing.

This has confirmed that some people have indeed been infected with the latest variant.

This laboratory analysis of the genetic material of the virus is key to detecting variants and finding out how they act.

It is likely there are many more cases of the variant already in the UK, but as yet undetected, because it can take a couple of weeks for this process to be completed.

The dominant variant of coronavirus is still Delta, which is responsible for around 40,000 new cases every day in the UK.

Do lateral flow tests detect Omicron?


Rapid or lateral flow tests, which can be used at home, can't tell you which variant you're infected with - but they are still thought to be able to tell you if you're negative or positive, even with Omicron.

What's the difference between Omicron and other variants?


The Omicron variant has lots of different mutations that haven't been seen before, and many that have.

A large number of them are on the spike protein of the virus, which is the target of most vaccines, and that's the main concern.

In standard tests, Omicron has what's known as an "S-gene dropout" which makes tracking positive cases which resemble the variant pretty easy.

But not all "S-gene dropouts" will necessarily be omicron - full genomic sequencing is needed to be sure.


What role does genomic sequencing play?


Analysing the genetic make-up of the virus is a crucial part of working how which variant is involved.

Up to 20% of the swabs from positive test results in the UK each week, or around 60,000 cases, are sent for genomic sequencing.

By looking closely at the genetic material provided, scientists can confirm whether someone is positive with Omicron or the already widely-circulating Delta.

This process only provides information about the swabs that are analysed - but using those results, scientists are able to estimate what proportion of new cases could be the new variant.

Scientists in the UK and South African are at the forefront of this technology, which is why most new variants have been detected in these countries. But that doesn't always mean they originated there.

What do we know about Omicron?


Very little is known about how the variant acts or how much of a threat it could be.

For example, it's not clear if it spreads more easily, if it makes people more unwell than other variants or if protection from vaccines will be less than previously thought.

But on paper it looks worrying and that's why governments are acting quickly, in case it's bad news.

Newsletter

Related Articles

0:00
0:00
Close
UK Crime and Policing Act 2026 Comes into Force with New Justice System Reforms
UK Prime Minister Hosts NATO Secretary General Mark Rutte for Security Talks at Downing Street
UK Tightens Oversight of Emissions Trading Scheme Through New Ministerial Directions
UK Issues Statement at UN Security Council on Violence in the West Bank
UK Environment Agency Clears Illegal Waste Site in West Yorkshire After Court Action
UK Resident Sentenced for Fraudulently Claiming £30,000 in Covid Business Loans
UK Launches Taskforce to Help Young People Claim Dormant Child Trust Fund Savings
UK Gambling Commission Fines Betfred Operator Petfre Gibraltar £900,000 Over Social Responsibility Failures
UK Appoints Lord Collins as Global Envoy for LGBT+ Rights
UK Expands Detention Capacity to Support Removal of Foreign Criminals and Failed Asylum Seekers
UK Resident Doctors End Strike Action After Accepting Government Pay Deal
UK Tightens Sentencing for Domestic Killings with 25-Year Starting Point for Murder of Partners
UK to Build at Least Six New Royal Navy Warships Under Expanded Defence Programme
UK Government Unveils £5 Billion Defence Investment Plan Focused on Drones and Autonomous Warfare Systems
UK Economy Records 0.6% First Quarter Growth as Services and Manufacturing Drive Steady Expansion
Welsh Government Unveils New Agricultural Support Plan Focused on Sustainability and Rural Growth
UK Teacher Recruitment Shortfalls Continue in Science and STEM Subjects
Police Scotland Expands Cybercrime Investigations Amid Rising Digital Fraud
UK Universities Warn of Risk to International Student Numbers Amid Visa Changes
UK Defence Ministry Pivots Toward Greater Domestic Military Procurement
UK Launches National Rail Review After Repeated Service Disruptions
Northern Ireland Assembly Debates Long-Term Funding Settlement for Public Services
UK Accelerates Approval of North Sea Offshore Wind Projects to Expand Energy Capacity
UK Retail Sales Fall as Households Cut Discretionary Spending in June
UK Expands Border Intelligence Cooperation with France and Belgium to Target Smuggling Networks
Scottish Government Faces Pressure Over Delays in Major Infrastructure and Transport Projects
UK Launches Multi-Billion-Pound Artificial Intelligence Infrastructure Investment Fund
National Health Service Warns of Continued Emergency Department Strain Across England
Bank of England Signals Interest Rate Hold as Wage Growth Keeps Inflation Elevated
UK Sets Emergency Fiscal Strategy as Inflation Pressures and Weak Manufacturing Growth Persist
UK Launches New Measures to Improve Safety Standards in Night-Time Venues
UK Tightens Import Rules for Low-Value Parcels to Support Domestic Retailers
UK Launches £85 Million Obesity Care Programme Targeting Early Intervention Projects
UK Commits Up to $26 Million to Ebola Response in Democratic Republic of Congo
Security Industry Authority Flags Safety Failures in Night-Time Economy Inspections
Cambridge South Railway Station Opens After £250 Million Investment
UK Moves to Close Import Duty Loophole for Small Parcels by 2028
UK Invests £85 Million in Projects to Transform Obesity Care
Berkeley Group Warns London Housebuilding Falling Far Short of Demand
UK Council Tax Arrears Rise to £9.3 Billion Amid Ongoing Household Financial Strain
Markets Watch Political Transition as Andy Burnham Emerges as Labour Leadership Frontrunner
Extreme Heat Raises Long-Term Risks for UK Inflation and Productivity, Analysts Warn
UK Health Alerts Extended as Record June Heatwave Grips England
UK Parliament Faces High-Stakes Week of Spending, Security and Industrial Legislation
UK Repeals Vagrancy Act Ending Criminalisation of Rough Sleeping in England and Wales
GB News Pundit Charged With Fraud Over Alleged Conduct as Former Labour Adviser
Reform UK Gains Parliamentary Visibility in First Senedd Opposition Appearance
Metropolitan Police Arrest Man on Suspicion of Attempted Murder After London Car Incident
Ocado Chief Executive Tim Steiner Faces Scrutiny Over £100 Million Remuneration Package
British Chambers of Commerce Downgrades UK Growth Outlook to 0.9 Percent for 2026
×