London Daily

Focus on the big picture.
Monday, Oct 05, 2026

Omicron: How do you detect it?

Omicron: How do you detect it?

The first cases of the new Omicron variant of coronavirus have now been detected in the UK, after it was highlighted by scientists in South Africa as a potentially worrying new strain.
What tests are used to detect Omicron?


Swabs from PCR tests, which are sent to a lab for analysis, detect whether people are infected with coronavirus or not.

Depending on which lab the swabs are sent to, some can also help identify particular variants, such as Delta or Omicron.

Between a third and a half of UK labs - but not all - have the required technology to do this.

PCR tests are the ones you can order from the government website if you have symptoms, or order from a private company if you need one for travel purposes. There are many different makes.

How do we know that Omicron is in the UK?


The swabs from PCR tests that have given a positive result for what looks like Omicron have been sent to a lab for a full genetic analysis, using a technique known as genomic sequencing.

This has confirmed that some people have indeed been infected with the latest variant.

This laboratory analysis of the genetic material of the virus is key to detecting variants and finding out how they act.

It is likely there are many more cases of the variant already in the UK, but as yet undetected, because it can take a couple of weeks for this process to be completed.

The dominant variant of coronavirus is still Delta, which is responsible for around 40,000 new cases every day in the UK.

Do lateral flow tests detect Omicron?


Rapid or lateral flow tests, which can be used at home, can't tell you which variant you're infected with - but they are still thought to be able to tell you if you're negative or positive, even with Omicron.

What's the difference between Omicron and other variants?


The Omicron variant has lots of different mutations that haven't been seen before, and many that have.

A large number of them are on the spike protein of the virus, which is the target of most vaccines, and that's the main concern.

In standard tests, Omicron has what's known as an "S-gene dropout" which makes tracking positive cases which resemble the variant pretty easy.

But not all "S-gene dropouts" will necessarily be omicron - full genomic sequencing is needed to be sure.


What role does genomic sequencing play?


Analysing the genetic make-up of the virus is a crucial part of working how which variant is involved.

Up to 20% of the swabs from positive test results in the UK each week, or around 60,000 cases, are sent for genomic sequencing.

By looking closely at the genetic material provided, scientists can confirm whether someone is positive with Omicron or the already widely-circulating Delta.

This process only provides information about the swabs that are analysed - but using those results, scientists are able to estimate what proportion of new cases could be the new variant.

Scientists in the UK and South African are at the forefront of this technology, which is why most new variants have been detected in these countries. But that doesn't always mean they originated there.

What do we know about Omicron?


Very little is known about how the variant acts or how much of a threat it could be.

For example, it's not clear if it spreads more easily, if it makes people more unwell than other variants or if protection from vaccines will be less than previously thought.

But on paper it looks worrying and that's why governments are acting quickly, in case it's bad news.

Newsletter

Related Articles

0:00
0:00
Close
BT Accused of Pressuring Vulnerable Customers During Digital Landline Shift
British Carmakers Warn of Growing Pressure From EU-China Tariff Dispute
Green Party of England and Wales Adopts Motion Defining Zionism as Racism
Medical Charity Threatens NHS Legal Action Over Two-Year Autism and ADHD Assessment Waits
British Transport Police Report Record Rise in Violence on Railways
Glasgow Council Workers Face Pay Cuts Under Fire-and-Rehire Plan
British Medical Groups Press Prime Minister Andy Burnham to Cancel £330 Million Palantir NHS Contract
UK Faces Record Bluetongue Outbreak Across Livestock Farms
UK Schools Report Thousands of Child-on-Child Sexual Offences
High Court Overturns Ban Blocking Gaza Families From Reuniting With Relatives in UK
G7 Authorizes Emergency Fuel Release as UK Diesel Prices Hit £2 a Litre
France and Italy Draw 1-1 in Nations League Match
Pope Leo XIV and Prince Albert II of Monaco Meet in Metz
SNCF Expands Low-Cost Ouigo High-Speed Service Between Lyon and Bordeaux
Paris Expands Dedicated Cargo Bike Routes for Urban Deliveries
French Film Industry Pushes for Tighter Streaming Investment Rules
Marseille Court Hands Down Prison Terms in Public Procurement Corruption Case
LVMH and Kering Rely on US Demand as Chinese Luxury Spending Slows
Toulouse Aerospace Sector Launches €80 Million Modernization Fund
Javier Milei Courts French Investment in LNG and Lithium
Mistral AI Launches Sovereign Model for European Public Services
French Competition Authority Fines Retailers €40 Million Over Misleading Promotions
France Records Exceptional Electricity Exports as Nuclear Output Recovers
Dassault Aviation Expands Rafale Assembly Capacity at Mérignac
Sanofi Invests €1 Billion in New Biologics Production Hub Near Lyon
France Protests Germany’s Extension of Border Controls Into 2027
French Public-Sector and Transport Unions Threaten National Strike
France Deploys Riot Police After Violence in Lyon Suburbs
French Anti-Terrorism Prosecutors Investigate Radicalized Flydubai Co-Pilot
France’s Defense Budget Surpasses NATO’s 2% of GDP Target
French Government Faces No-Confidence Threat Over Budget
France and G7 Release 100 Million Barrels From Strategic Oil Reserves
France Convenes Emergency Defense Council Over Threats to Commercial Shipping
France and Germany Coordinate Military Response After Russian Strikes on Kyiv Infrastructure
UK Police Release Six Iranian Nationals on Bail After RAF Fairford Security Alert
UK Business Confidence Falls as Energy Costs and Tax Uncertainty Rise
Cornwall Insight Warns UK Energy Bills Could Rise 16% in January
UK Introduces Zero VAT on Household Electricity Bills
UK 30-Year Gilt Yield Hits 6% as Bond Market Pressures Intensify
UK Introduces Stricter Subcontractor Checks and Expanded Trade Union Access
Green Party Proposes Three-Year Emergency Freeze on Private Rent Increases
UK Treasury Committee Seeks Tax Clarification Over Manchester City Investigation
Royal Marines Deploy to Faroe Islands for Northern European Security Exercise
UK Business Confidence Weakens as High Costs Delay Investment
UK GDP Growth Revised Up to 0.5% in Second Quarter
Bank of England Warns of Financial Stability Risks From Autonomous AI
UK Expands Early Prisoner Release Scheme to Ease Overcrowding
UK Records Worst Bluetongue Outbreak on Record Across Livestock Farms
UK Government Faces Shrinking Fiscal Headroom Ahead of October 28 Budget
UK 30-Year Gilt Yield Reaches 6% as Energy Shock Drives Borrowing Costs Higher
×